sga¶
SGA - String Graph Assembler. SGA is a de novo assembler for DNA sequence reads. It is based on Gene Myers string graph formulation of assembly and uses the FM-index/Burrows-Wheeler transform to efficiently find overlaps between sequence reads.
| Home | https://github.com/jts/sga |
| Versions | 0.10.13 |
| License | GPLv3 |
| Recipe | https://github.com/bioconda/bioconda-recipes/tree/master/recipes/sga |
Installation¶
With an activated Bioconda channel (see Setup and usage), install with:
conda install sga
and update with:
conda update sga