.. _`sga`:

sga
===

SGA - String Graph Assembler. SGA is a de novo assembler for DNA sequence reads. It is based on Gene Myers string graph formulation of assembly and uses the FM-index/Burrows-Wheeler transform to efficiently find overlaps between sequence reads.

======== ===========
Home     https://github.com/jts/sga
Versions 0.10.13
License  GPLv3
Recipe   https://github.com/bioconda/bioconda-recipes/tree/master/recipes/sga
======== ===========

Installation
------------

.. highlight: bash

With an activated Bioconda channel (see :ref:`setup`), install with::

   conda install sga

and update with::

   conda update sga