bioconductor-edger¶
Differential expression analysis of RNA-seq expression profiles with biological replication. Implements a range of statistical methodology based on the negative binomial distributions, including empirical Bayes estimation, exact tests, generalized linear models and quasi-likelihood tests. As well as RNA-seq, it be applied to differential signal analysis of other types of genomic data that produce counts, including ChIP-seq, SAGE and CAGE.
| Home | http://bioconductor.org/packages/release/bioc/html/edgeR.html |
| Versions | 3.12.0 |
| License | GPL (>=2) |
| Recipe | https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-edger |
Installation¶
With an activated Bioconda channel (see Setup and usage), install with:
conda install bioconductor-edger
and update with:
conda update bioconductor-edger