bioconductor-genomicfeatures¶
A set of tools and methods for making and manipulating transcript centric annotations. With these tools the user can easily download the genomic locations of the transcripts, exons and cds of a given organism, from either the UCSC Genome Browser or a BioMart database (more sources will be supported in the future). This information is then stored in a local database that keeps track of the relationship between transcripts, exons, cds and genes. Flexible methods are provided for extracting the desired features in a convenient format.
| Home | http://bioconductor.org/packages/release/bioc/html/GenomicFeatures.html |
| Versions | 1.22.6 |
| License | Artistic-2.0 |
| Recipe | https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-genomicfeatures |
Installation¶
With an activated Bioconda channel (see Setup and usage), install with:
conda install bioconductor-genomicfeatures
and update with:
conda update bioconductor-genomicfeatures