jellyfish¶

Jellyfish is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences of all such substrings is a central step in many analyses of DNA sequence

Home	http://www.genome.umd.edu/jellyfish.html
Versions	2.2.3, 1.1.11
License	GPLv3
Recipe	https://github.com/bioconda/bioconda-recipes/tree/master/recipes/jellyfish

Installation¶

With an activated Bioconda channel (see Setup and usage), install with:

conda install jellyfish

and update with:

conda update jellyfish