.. _`lofreq`:

lofreq
======

A fast and sensitive variant-caller for inferring SNVs and indels from next-generation sequencing data

======== ===========
Home     http://csb5.github.io/lofreq/
Versions 2.1.2
License  MIT
Recipe   https://github.com/bioconda/bioconda-recipes/tree/master/recipes/lofreq
======== ===========

Installation
------------

.. highlight: bash

With an activated Bioconda channel (see :ref:`setup`), install with::

   conda install lofreq

and update with::

   conda update lofreq