.. _`chromhmm`:

chromhmm
========

ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate multiple chromatin datasets such as ChIP-seq data of various histone modifications to discover de novo the major re-occuring combinatorial and spatial patterns of marks.

======== ===========
Home     http://compbio.mit.edu/ChromHMM/
Versions 1.11
License  GPLv3
Recipe   https://github.com/bioconda/bioconda-recipes/tree/master/recipes/chromhmm
======== ===========

Installation
------------

.. highlight: bash

With an activated Bioconda channel (see :ref:`setup`), install with::

   conda install chromhmm

and update with::

   conda update chromhmm