.. _`bioconductor-genomicalignments`:

bioconductor-genomicalignments
==============================

Provides efficient containers for storing and manipulating short genomic alignments (typically obtained by aligning short reads to a reference genome). This includes read counting, computing the coverage, junction detection, and working with the nucleotide content of the alignments.

======== ===========
Home     http://bioconductor.org/packages/release/bioc/html/GenomicAlignments.html
Versions 1.6.3
License  Artistic-2.0
Recipe   https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-genomicalignments
======== ===========

Installation
------------

.. highlight: bash

With an activated Bioconda channel (see :ref:`setup`), install with::

   conda install bioconductor-genomicalignments

and update with::

   conda update bioconductor-genomicalignments